Detailed information of matrix profile PL0019.1

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Profile summary
Name: hlh-1
Matrix ID: PL0019.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: P22980  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 16 21 25 70 2 92 12 1 1 1 16 2 30 35 33 31 ]
C [ 9 31 7 6 92 1 13 71 3 2 7 64 12 17 19 21 ]
G [ 35 34 64 11 2 3 71 13 1 92 3 7 44 19 35 35 ]
T [ 37 13 2 11 1 1 1 12 92 2 71 25 12 27 11 10 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0019.1 PL0019 1 hlh-1 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: