Detailed information of matrix profile PL0019.1

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Profile summary
Name: hlh-1
Matrix ID: PL0019.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: P22980  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 10 11 27 12 25 71 2 92 12 1 1 1 11 2 13 37 ]
C [ 35 35 19 44 7 3 92 1 13 71 3 2 11 64 34 35 ]
G [ 21 19 17 12 64 7 2 3 71 13 1 92 6 7 31 9 ]
T [ 31 33 35 30 2 16 1 1 1 12 92 2 70 25 21 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0019.1 PL0019 1 hlh-1 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: