Detailed information of matrix profile UN0157.1

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Profile summary

Name: ZIM3
Matrix ID: UN0157.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation:
Uniprot ID: Q96PE6  
Source: 30462313
Comment: Matches motif discovered by RCADE. The evidences are ChIp-seq from the same lab with the same cell line.

Sequence logo

Frequency matrix

         
A [ 7997 5508 5336 16896 16502 853 17067 194 15879 16933 14228 2482 1365 2931 7603 ]
C [ 2113 3390 8338 118 107 15856 38 72 840 90 306 7474 15232 5918 4141 ]
G [ 4156 5701 1327 106 229 435 39 16877 165 110 575 3674 109 848 2389 ]
T [ 2954 2621 2219 100 382 76 76 77 336 87 2111 3590 514 7523 3087 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0157.1 UN0157 1 ZIM3 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

log(P-value) = -16421.3

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: