Detailed information of matrix profile UN0157.1

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Profile summary

Name: ZIM3
Matrix ID: UN0157.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation:
Uniprot ID: Q96PE6  
Source: 30462313
Comment: Matches motif discovered by RCADE. The evidences are ChIp-seq from the same lab with the same cell line.

Sequence logo

Frequency matrix

         
A [ 3087 7523 514 3590 2111 87 336 77 76 76 382 100 2219 2621 2954 ]
C [ 2389 848 109 3674 575 110 165 16877 39 435 229 106 1327 5701 4156 ]
G [ 4141 5918 15232 7474 306 90 840 72 38 15856 107 118 8338 3390 2113 ]
T [ 7603 2931 1365 2482 14228 16933 15879 194 17067 853 16502 16896 5336 5508 7997 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0157.1 UN0157 1 ZIM3 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

log(P-value) = -16421.3

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: