Detailed information of matrix profile UN0365.1

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Profile summary

Name: GT-2
Matrix ID: UN0365.1
Class: Helix-Turn-Helix
Family: Trihelix
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q39117  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1752 1190 126 148 49 3227 3723 3530 3348 3027 1494 1449 ]
C [ 404 854 22 18 24 67 25 63 52 173 467 437 ]
G [ 784 587 3652 3664 19 202 49 96 47 209 543 680 ]
T [ 905 1214 45 15 3753 349 48 156 398 436 1341 1279 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0365.1 UN0365 1 GT-2 Arabidopsis thaliana
Trihelix Helix-Turn-Helix
     

log(P-value) = -2029.93

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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