JASPAR CORE

  1. Home
  2. Collection core

Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0481.1 FOXP1 Homo sapiens Fork head / winged helix factors Forkhead box (FOX) factors
MA0481.2 FOXP1 Homo sapiens Fork head / winged helix factors Forkhead box (FOX) factors
MA0481.3 FOXP1 Homo sapiens Fork head / winged helix factors Forkhead box (FOX) factors
MA0482.1 Gata4 Mus musculus Other C4 zinc finger-type factors GATA-type zinc fingers
MA0482.2 GATA4 Homo sapiens Other C4 zinc finger-type factors GATA-type zinc fingers
MA0483.1 Gfi1b Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0484.1 HNF4G Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0484.2 HNF4G Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0485.1 Hoxc9 Mus musculus Homeo domain factors HOX-related factors
MA0485.2 HOXC9 Homo sapiens Homeo domain factors HOX-related factors
Showing 10 profiles of page 65 from 197 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.