JASPAR Collection UNVALIDATED

  1. Home
  2. Collection unvalidated

Total 337 profiles

These profiles are regarded as unvalidated because our curators failed to find any orthogonal support from existing literature. We encourage the community to perform experiments and/or point us to literature that our curators missed in order to support these profiles.
Display profiles
ID Name Species Class Family Sequence logo
UN0298.1 ANIA_10541 Emericella nidulans C6 zinc cluster factors
UN0299.1 ANIA_10597 Emericella nidulans C6 zinc cluster factors
UN0300.1 ANIA_10600 Emericella nidulans C6 zinc cluster factors
UN0301.1 ANIA_10789 Emericella nidulans C6 zinc cluster factors
UN0302.1 ANIA_10912 Emericella nidulans C6 zinc cluster factors
UN0303.1 Phyra42912 Phytophthora ramorum C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
UN0304.1 Phyra84400 Phytophthora ramorum C2H2 zinc finger factors More than 3 adjacent zinc finger factors
UN0305.1 ADNP Homo sapiens Homeo domain factors HD-ZF factors
UN0306.1 DACH1 Homo sapiens SKI / DACH domain factors DACH / dachshund-related factors
UN0307.1 EOMES Homo sapiens T-Box factors TBrain-related factors
Showing 10 profiles of page 26 from 34 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.